Biology

Independent wet-lab or dry-lab research for Biology majors, under the supervision of a University of Virginia faculty member in the Department of Biology, with emphasis on experimental design, data acquisition, and data interpretation. Instructor permission required; prior completion of any one of BIOL 3000, BIOL 3010, or BIOL 3020 strongly recommended.

This course is the final semester of Independent Research for participants of the Biology Distinguished Majors Program. During this semester, students will complete their laboratory investigations, ultimately presenting the sum of their work in a written thesis. Prerequisite: Instructor Permission

This course will provide students with essential hands-on experience in experimental design, data collection, analysis, and science communication. Students will have the opportunity to think critically and creatively about biology and to develop research competencies. Students will work with a mentor to develop a project that makes a unique scientific contribution and will communicate their research to a broader audience at the University's Undergraduate Research Symposium or similar.

Practical usage of various microscopy imaging methodologies to study the morphology and cellular function in various biological systems from single cell to single molecule in cells and tissues. Topics include basics theory of microscopy, imaging and image analysis to solve various biological questions, fluorophore labeling, technical and hands on training on various microscopy techniques applied in different biological and biomedical investigations. Lectures, discussion, student presentations and laboratory.

The course will deep dive into what stem cells are, what they do, where and how they function, and how we can use stem cells in the clinic to repair damaged tissue and restore tissue function. The course will consist of a series of lectures and student run discussions related to current scientific literature.

The evolutionary history of a population can be studied by examining patterns of genetic variation among individuals from a species. In this lab course, you will learn how to utilize genomic data to make evolutionary inferences. Together, we will learn fundamentals of population genetics, how to conduct bioinformatic research on high-performance computers, how to take raw sequence data and turn it into biological insight, and how to present the results of your research.

This course will focus mainly on research about Alzheimer's disease, and will meet once a week for 3 hours The first 3 weeks will be primarily didactic, and the remainder of the course will be a "journal club" in which primary research paper discussions will be led by teams of students. Assessments will be based on how well students lead and participate in discussions, and on exams.

Despite the many benefits of asexual reproduction, the vast majority of eukaryotic organisms reproduce sexually. How sex evolved, and how it persists despite its many associated costs, are major unanswered questions in biology. We will explore the diversity of sexual reproduction and associated evolutionary phenomena with a focus on critically evaluating current research and theory in this field.Prerequisite: BIOL 3020 or permission from Instructor

This intensive, graduate-level course is designed to provide a foundational understanding of the principles underlying the development, genetics, and molecular-cellular biology of the nervous system. Over the span of the semester, students will engage with three core areas of neuroscience: Genetics in Neuroscience, Neurodevelopment, Molecular and Cellular Biology (MCB) of Neurons.

This advanced undergraduate course explores how cells communicate with each other and respond to their environment. This area of biology is referred to as signal transduction and is the basis for most if not all normal and disease processes in humans. Therefore, significant time is spent on defining archetypal signaling modules that all cells use to receive and communicate information to and from their environment.

This is a journal club format colloquium where we perform an in depth analysis of the papers listed below. One paper will be covered per week with a review article also assigned for background. There are no presenters; rather we will have discussion leaders. All participants should be prepared to present any of the panels in the week's paper.

New course in the subject of biology.

The extraordinary diversity of the southern Appalachians will be used to explore the world of plants. We will visit unique mountain habitats to study the different species assemblages in these ecologically wide-ranging sites. Based upon our observations and analyses, we will critique contemporary views of the most effective conservation units (individual, population, species, family, habitat) and the methods used to achieve conservation goals.

We will focus on the ecology and evolution of reptiles and amphibians, leveraging their diversity in the southeastern US. In both the field and laboratory, we will study 1) the evolutionary relationships among reptiles and amphibians, 2) key evolutionary innovations that characterize each major lineage, 3) reptile and amphibian systems in ecological and evolutionary research, and 4) location and identification of reptiles and amphibians.

MLBS sits on the Eastern Continental Divide providing an incredible diversity of freshwater habitats. Proficiency in ichthyology will be developed through field trips and lab work. Themes include: fish ID; patterns and drivers of diversity; interactions on individual, population, community and ecosystem levels; evolution; and influences of human activities. Students will design and conduct a research project and present at a class symposium.

Insects are perhaps the most important animal group on the face of the earth. Their enormous diversity makes them important models for understanding many concepts in biology. Students will observe the bits and pieces of an insect, they will discover how adaptation relates to diversity, and they will learn to identify the major insect groups. Field trips to varied habitats allow students to collect insects and understand their natural history.

This course focuses on the ecology and evolution of infectious diseases in wild animal populations. Topics include the population biology of parasites and pathogens, host immune defenses and pathogen virulence, and wildlife conservation and disease. Students will gain experience with quantitative methods and field and laboratory techniques, including parasite identification and handling of insects, birds, amphibians, and small mammals.

This course will illustrate principles of behavior and provide experience with methods used in animal behavior research. Students will develop an understanding of the scientific process as applied to behavior research, learn how behavior evolves and why we see the behavioral patterns that we do, and learn how to conduct research in wild populations. The class will work collaboratively to develop and carry out a field research project.

Independent research for qualified graduates under the direction of a faculty member within the Biology Department.

A weekly conference in which students present reports covering various aspects of Integrative Biology. May be repeated for credit.

Integrative Biology seeks to understand how genetic, cellular, and developmental processes give rise to organismal phenotypes and how changes in these processes over time contribute to the evolution of form and function. In this course, graduate students will learn principles of genetics, cell, developmental, and organismal biology and apply this knowledge towards answering fundamental questions in biology.

A weekly conference arranged around a current topic. May be repeated for credit. Prerequisite: Instructor permission.

This weekly colloquium provides a forum for exploring cutting-edge research in fundamental neuroscience. The course format includes journal club discussions of recent high-impact publications, as well as presentations of ongoing research by both students and faculty members.

This course introduces grad students to a breadth and depth of concepts and theories in modern ecology and evolutionary biology. The couse is co-taught by two BIOL faculty each fall, with different faculty rotating into the course in alternate years, providing expertise in molecular population genetics, genomics, phylogenetics, integrative biology, speciation, microevolution, life-history evolution, and mating systems.

This course introduces grad students to a breadth and depth of concepts and theories in modern ecology and evolutionary biology.. The course is taught by a different BIOL faculty each spring, with different faculty rotating into the course in alternate years, providing expertise in molecular population genetics, genomics, phylogenetics, integrative biology, speciation, microevolution, life-history evolution, and mating systems.